Visual example of the minimizer and open syncmer selection methods with

a) Example of selecting minimizers with k = 3, w = 5, and the

An example of running the Miniception in a window. The k 0 -mers

Jim Shaw's research works University of Toronto, Toronto (U of T) and other places

A survey of mapping algorithms in the long-reads era

Jim Shaw on X: Me and @YunWilliamYu's work on local k-mer selection techniques is now accepted to Bioinformatics! We investigate both practically and theoretically the properties of different local k-mer selection techniques

Parameterized syncmer schemes improve long-read mapping

39885 PDFs Review articles in DNA SEQUENCE ANALYSIS

A survey of mapping algorithms in the long-reads era

Minimizer and syncmer schemes. In both examples the lexicographic

Yun William Yu's research works University of Toronto, Toronto (U of T) and other places

a) Example of selecting minimizers with k = 3, w = 5, and the

Speed and percentage speed up of each Bowtie2 variant on GCAT benchmarks

Sequence-specific minimizers via polar sets